Publications


A complete framework for hyperbolic acoustic localization with application to northern bobwhite covey calls


Long Duong, Rowdy White, Brad Dabbert, Hamed Sari-Sarraf

Ecological Informatics, 2024


CottonSense: A high-throughput field phenotyping system for cotton fruit segmentation and enumeration on edge devices


Farshad Bolouri, Y. Kocoglu, I. L. Pabuayon, Glen L. Ritchie, Hamed Sari-Sarraf

Computers and Electronics in Agriculture, 2024


Deep learning assisted holography microscopy for in-flow enumeration of tumor cells in blood


Anirudh Gangadhar, Hamed Sari-Sarraf, S. Vanapalli

RSC Advances, 2023


Detection of live breast cancer cells in bright-field microscopy images containing white blood cells by image analysis and deep learning


Golnaz Moallem, Adity A. Pore, Anirudh Gangadhar, Hamed Sari-Sarraf, Siva A. Vanapalli

Journal of Biomedical Optics, vol. 27, SPIE, 2022, p. 076003


Automated detection of apoptotic versus nonapoptotic cell death using label‐free computational microscopy


Md. Alamgir Kabir, Ashish Kharel, Saloni Malla, Zachary Joseph Kreis, Peuli Nath, Jared Wolfe, Marwa Hassan, Devinder Kaur, H. Sari-Sarraf, A. Tiwari, Aniruddha Ray

Journal of Biophotonics, 2021


An explainable deep vision system for animal classification and detection in trail-camera images with automatic post-deployment retraining


Golnaz Moallem, Don Pathirage, Joel Reznick, J. Gallagher, H. Sari-Sarraf

Knowledge-Based Systems, 2020


Cotton boll distribution and yield estimation using three‐dimensional point cloud data


Nothabo Dube, Benjamin Bryant, H. Sari-Sarraf, G. Ritchie

Agronomy Journal, 2020


In Situ Cotton Leaf Area Index by Height Using Three‐Dimensional Point Clouds


Nothabo Dube, Benjamin Bryant, H. Sari-Sarraf, Brendan R. Kelly, C. Martin, S. Deb, G. Ritchie

Agronomy Journal, 2019


Detecting and segmenting overlapping red blood cells in microscopic images of thin blood smears


Golnaz Moallem, H. Sari-Sarraf, Mahdieh Poostchi, R. Maude, K. Silamut, M. A. Hossain, Sameer Kiran Antani, Stefan Jaeger, G. Thoma

Medical Imaging, 2018


Imaging photonic crystals using Fourier plane imaging and Fourier ptychographic microscopy techniques implemented with a computer controlled hemispherical digital condenser


Sanchari Sen, Darshan B. Desai, Meznh H. Alsubaie, Maksym V. Zhelyeznyakov, Luis Molina, H. S. Sarraf, A. Bernussi, L. Peralta

Optics Communications, 2017


A Kernel Support Vector Machine Trained Using Approximate Global and Exhaustive Local Sampling


Benjamin Bryant, H. Sari-Sarraf, L. R. Long, Sameer Kiran Antani

BDCAT, 2017


Training a New Instrument to Measure Cotton Fiber Maturity Using Transfer Learning


C. Turner, H. Sari-Sarraf, E. Hequet

IEEE Transactions on Instrumentation and Measurement, 2017


Machine Vision System for Characterizing Horizontal Wicking and Drying Using an Infrared Camera


Mesfin Dema, C. Turner, H. Sari-Sarraf, E. Hequet

IEEE Transactions on Industrial Informatics, 2016


A Client-Server Tool for Automatic Fast GPU-based Detection of Squamous Epithelium Tissue Regions in Histology Images


Z. Xue, Benjamin Bryant, Rodney Long, S. Antani, Hamed Sari-Sarraf, G. Thoma, Mitchell Wachtel

2014


Fast GPU-based segmentation of H&E stained squamous epithelium from multi-gigapixel tiled virtual slides


Benjamin Bryant, H. Sari-Sarraf, M. Wachtel, L. Long, Sameer Kiran Antani

Medical Imaging, 2013


A machine vision system to estimate cotton fiber maturity from longitudinal view using a transfer learning approach


M. Shahriar, I. Scott-Fleming, H. Sari-Sarraf, E. Hequet

Machine Vision and Applications, 2013


Integrating shape into an interactive segmentation framework


S. Kamalakannan, Benjamin Bryant, H. Sari-Sarraf, L. Long, Sameer Kiran Antani, G. Thoma

Medical Imaging, 2013


A Maximum Entropy Based Data-Driven 3D Scene Generation


Mesfin Dema, H. Sari-Sarraf

International Journal of Semantic Computing, 2013


Machine vision scheme for stain-release evaluation using Gabor filters with optimized coefficients


Cui Mao, A. Gururajan, H. Sari-Sarraf, E. Hequet

Machine Vision and Applications, 2012


Generalized framework for a user-aware interactive texture segmentation system


A. Gururajan, H. Sari-Sarraf, E. Hequet

J. Electronic Imaging, 2012


Feature-based transfer learning to train a novel cotton imaging system


M. Shahriar, H. Sari-Sarraf, E. Hequet

2012 IEEE Southwest Symposium on Image Analysis and Interpretation, 2012


3D Scene Generation by Learning from Examples


Mesfin Dema, H. Sari-Sarraf

IEEE International Symposium on Multimedia, 2012


Training a New Cotton Imaging System Via a Transfer Learning Approach


M. Shahriar, I. Scott-Fleming, H. Sari-Sarraf, E. Hequet

2011


Dimensional change measurement and stain segmentation in printed fabrics


M. Hill, S. Kamalakannan, A. Gururajan, H. Sari-Sarraf, E. Hequet

2011


On the creation of a segmentation library for digitized cervical and lumbar spine radiographs


A. Gururajan, S. Kamalakannan, H. Sari-Sarraf, M. Shahriar, L. Long, Sameer Kiran Antani

Comput. Medical Imaging Graph., 2011


Verification & validation of a semantic image tagging framework via generation of geospatial imagery ground truth


S. Gleason, Mesfin Dema, H. Sari-Sarraf, A. Cheriyadat, Ranga Raju Vatsavai, R. Ferrell

IEEE International Geoscience and Remote Sensing Symposium, 2011


Double-Edge Detection of Radiographic Lumbar Vertebrae Images Using Pressurized Open DGVF Snakes


S. Kamalakannan, A. Gururajan, H. Sari-Sarraf, L. Long, Sameer Kiran Antani

IEEE Transactions on Biomedical Engineering, 2010


Graphical processing unit-based machine vision system for simultaneous measurement of shrinkage and soil release in fabrics


S. Kamalakannan, A. Gururajan, M. Hill, M. Shahriar, H. Sari-Sarraf, E. Hequet

J. Electronic Imaging, 2010


Interactive texture segmentation via IT-SNAPS


A. Gururajan, H. Sari-Sarraf, E. Hequet

Southwest Symposium on Image Analysis and Interpretation, 2010


Assessing fabric stain release with a GPU implementation of statistical snakes


S. Kamalakannan, A. Gururajan, M. Shahriar, M. Hill, J. Anderson, H. Sari-Sarraf, E. Hequet

Electronic imaging, 2009


Analysis Tool for Digitized Cervical and Lumbar Vertebrae Images


A. Gururajan, S. Kamalakannan, M. Shahriar, H. Sari-Sarraf

2008 IEEE Southwest Symposium on Image Analysis and Interpretation, 2008


Objective Evaluation of Soil Release in Fabrics


A. Gururajan, E. Hequet, H. Sari-Sarraf

2008


Accurate length measurement of multiple cotton fibers


Huapeng Wang, Cui Mao, H. Sari-Sarraf, E. Hequet

International Conference on Quality Control by Artificial Vision, 2008


Statistical modeling, detection, and segmentation of stains in digitized fabric images


A. Gururajan, H. Sari-Sarraf, E. Hequet

Electronic imaging, 2007


Objective Evaluation of Durable Press Treatments and Fabric Smoothness Ratings


N. Abidi, E. Hequet, C. Turner, H. Sari-Sarraf

2005


Textile Topics (Winter/Spring 2005)


N. Abidi, E. Hequet, C. Turner, H. Sari-Sarraf

2005


Fabric smoothness evaluation using the wavelet domain independent mixture model and a landform classification technique


C. Turner, H. Chan, H. Sari-Sarraf, E. Hequet

IS&T/SPIE Electronic Imaging, 2005


Cotton trash assessment in radiographic x-ray images with scale-space filtering and stereo analysis


Mehmet S. Dogan, H. Sari-Sarraf, E. Hequet

IS&T/SPIE Electronic Imaging, 2005


Preliminary validation of a fabric smoothness assessment system


C. Turner, H. Sari-Sarraf, E. Hequet, Noureddine Abidi, Sunho Lee

J. Electronic Imaging, 2004


Hierarchical segmentation of cervical and lumbar vertebrae using a customized generalized Hough transform and extensions to active appearance models


Benjamin M. Howe, A. Gururajan, H. Sari-Sarraf, L. R. Long

6th IEEE Southwest Symposium on Image Analysis and Interpretation, 2004., 2004


Segmentation and classification of four common cotton contaminants in x-ray microtomographic images


S. Pavani, Mehmet S. Dogan, H. Sari-Sarraf, E. Hequet

IS&T/SPIE Electronic Imaging, 2004


Hierarchical segmentation of vertebrae from x-ray images


G. Zamora, Hamed Sari-Sarraf, Rodney Long

SPIE Medical Imaging, 2003


Probabilistic shape and appearance model for scene segmentation


S. Gleason, M. Abidi, H. Sari-Sarraf

Proceedings 2002 IEEE International Conference on Robotics and Automation (Cat. No.02CH37292), 2002


Volumetric segmentation via 3D active shape models


M. Dickens, S. Gleason, H. Sari-Sarraf

Proceedings Fifth IEEE Southwest Symposium on Image Analysis and Interpretation, 2002


Analysis of the feasibility of using active shape models for segmentation of gray-scale images


G. Zamora, H. Sari-Sarraf, S. Mitra, Rodney Long

SPIE Medical Imaging, 2002


A new deformable model for analysis of X-ray CT images in preclinical studies of mice for polycystic kidney disease


S. Gleason, H. Sari-Sarraf, M. Abidi, O. Karakashian, F. Morandi

IEEE Transactions on Medical Imaging, 2002


Recognition of cotton contaminants via X-ray microtomographic image analysis


A. Pai, H. Sari-Sarraf, E. Hequet

Conference Record of the 2002 IEEE Industry Applications Conference. 37th IAS Annual Meeting (Cat. No.02CH37344), 2002


Image-processing algorithm for automatic assessment of fabric shrinkage


H. Sari-Sarraf, E. Hequet, N. Abidi, Yongmei Dai, H. Chan, M. Jaššo, Ben Morris

IS&T/SPIE Electronic Imaging, 2002


Automatic assessment of fabric smoothness


C. Turner, H. Sari-Sarraf, Aijun Zhu, E. Hequet, Sunho Lee

The 2002 45th Midwest Symposium on Circuits and Systems, 2002. MWSCAS-2002., 2002


Customized Hough transform for robust segmentation of cervical vertebrae from X-ray images


A. Tezmol, H. Sari-Sarraf, S. Mitra, Rodney Long, A. Gururajan

Proceedings Fifth IEEE Southwest Symposium on Image Analysis and Interpretation, 2002


Preliminary validation of content-based compression of mammographic images


Brad Grinstead, H. Sari-Sarraf, S. Gleason, S. Mitra

SPIE Medical Imaging, 2001


Estimation of orientation and position of cervical vertebrae for segmentation with active shape models


G. Zamora, H. Sari-Sarraf, S. Mitra, Rodney Long

SPIE Medical Imaging, 2001


Streamlined volumetric landmark placement method for building three-dimensional active shape models


M. Dickens, H. Sari-Sarraf, S. Gleason

SPIE Medical Imaging, 2001


Impact of intensity edge map on segmentation of noisy range images


Yan Zhang, Yiyong Sun, H. Sari-Sarraf, M. Abidi

Electronic imaging, 2000


Automatic screening of polycystic kidney disease in x-ray CT images of laboratory mice


S. Gleason, H. Sari-Sarraf, M. Paulus, Dabney K. Johnson, M. Abidi

Image Processing, 2000


Content-based compression of mammograms for telecommunication and archiving


Brad Grinstead, H. Sari-Sarraf, S. Mitra, S. Gleason

Proceedings 13th IEEE Symposium on Computer-Based Medical Systems. CBMS 2000, 2000


Vision system for on‐line characterization of paper slurry


H. Sari-Sarraf, J. Goddard, Besma Roui-Abidi, M. Hunt

International journal of imaging systems and technology (Print), 2000


Statistical-based deformable models with simultaneous optimization of object gray-level and shape characteristics


S. Gleason, M. Paulus, Dabney K. Johnson, H. Sari-Sarraf, M. Abidi

4th IEEE Southwest Symposium on Image Analysis and Interpretation, 2000


High-resolution x-ray CT screening of mutant mouse models


M. Paulus, S. Gleason, H. Sari-Sarraf, Dabney K. Johnson, C. Foltz, D. Austin, M. Easterly, E. J. Michaud, M. Dhar, P. Hunsicker, J. W. Wall, M. Schell

Biomedical optics, 2000


Reconstruction of multi-energy X-ray computed tomography images of laboratory mice


S. Gleason, H. Sari-Sarraf, M. Paulus, Dabney K. Johnson, S. Norton, M. Abidi

1999


Depth measurement of moving slurry at the wet end of a paper machine


J. Goddard, H. Sari-Sarraf, J. C. Turner, M. Hunt, B. Abidi

Electronic imaging, 1999


Surface Characterization of a Paper Web at the Wet End


B. Abidi, J. Goddard, H. Sari-Sarraf

1999


Facet model and mathematical morphology for surface characterization


B. Abidi, H. Sari-Sarraf, J. Goddard, M. Hunt

Optics East, 1999


Front-end data reduction in computer-aided diagnosis of mammograms: a pilot study


H. Sari-Sarraf, S. Gleason, R. Nishikawa

Medical Imaging, 1999


Feasibility of telemammography as biomedical application for breast imaging


Barbara G. Beckerman, S. Batsell, L. MacIntyre, H. S. Sarraf, S. Gleason, M. Schnall

Biomedical optics, 1999


On-line characterization of slurry for monitoring headbox performance


H. Sari-Sarraf, J. Goddard, J. C. Turner, Hunt, B. Abidi

1998


Robust defect segmentation in woven fabrics


H. Sari-Sarraf, J. Goddard

Proceedings. 1998 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (Cat. No.98CB36231), 1998


Vision system for on-loom fabric inspection


Hamed Sari-Sarraf, James S. Goddard

1998 IEEE Annual Textile, Fiber and Film Industry Technical Conference (Cat. No.98CH36246), 1998


A new X-ray computed tomography system for laboratory mouse imaging


Michael J. Paulus, Hamed Sari-Sarraf, S. Gleason, M. Bobrek, J. S. Hicks, Dabney K. Johnson, J. K. Behel, L. H. Thompson, W. C. Allen

1998 IEEE Nuclear Science Symposium Conference Record. 1998 IEEE Nuclear Science Symposium and Medical Imaging Conference (Cat. No.98CH36255), 1998


Reconstruction of high-resolution, multi-energy, X-ray computed tomography laboratory mouse images


S. Gleason, H. Sari-Sarraf, M. Paulus, D.K. Johnson, S. Norton, M. Abidi

1998 IEEE Nuclear Science Symposium Conference Record. 1998 IEEE Nuclear Science Symposium and Medical Imaging Conference (Cat. No.98CH36255), 1998


A generalized development environment for inspection of web materials


D. Brzakovic, P. Bakic, N. Vujovic, H. Sari-Sarraf

Proceedings of International Conference on Robotics and Automation, 1997


A shift-invariant discrete wavelet transform


H. Sari-Sarraf, D. Brzakovic

IEEE Transactions on Signal Processing, 1997


Higher accuracy and throughput in computer-aided screening of mammographic microcalcifications


S. Gleason, H. Sari-Sarraf, K. Hudson, K. Hubner

IEEE Nuclear Science Symposium Conference Record, 1997


A novel approach to computer-aided diagnosis of mammographic images


H. Sari-Sarraf, S. Gleason, K. Hudson, K. Hubner

Proceedings Third IEEE Workshop on Applications of Computer Vision. WACV'96, 1996


Image paradigm for semiconductor defect data reduction


K. Tobin, S. Gleason, T. Karnowski, H. Sari-Sarraf, M. Bennett

Advanced Lithography, 1996


Online optical measurement and monitoring of yarn density in woven fabrics


H. Sari-Sarraf, J. Goddard

Other Conferences, 1996


Model-based flaw detection and classification in web materials


D. Brzakovic, H. Sari-Sarraf, M. Neskovic

Defense, Security, and Sensing, 1994


Automated inspection of nonwoven web materials: a case study


D. Brzakovic, H. Sari-Sarraf

Electronic imaging, 1994


One-dimensional signal classification by multiscale wavelet representation


H. Sari-Sarraf, D. Brzakovic

Defense, Security, and Sensing, 1992


Two-dimensional signal classification by multiscale wavelet representation


H. Sari-Sarraf, D. Brzakovic

Optics & Photonics, 1992


Multiresolution segmentation of forward-looking IR and SAR imagery using neural networks


H. Beck, D. Bergondy, Joe R. Brown, H. Sari-Sarraf

Other Conferences, 1991


Automated iterative noise filtering [image processing]


H. Sari-Sarraf, D. Brzakovic

IEEE Transactions on Signal Processing, 1991

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